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Base Theme Multisite Customizations

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I have a multisite network with three sites.

One of the sites is finished, and I have used the mu-domain-mapping plugin to map it to a new domain.

The logo header for this site is linking back to the page that I created the site on, instead of the root of the new mapped domain.

I found the article to update the functions.php file to include the new link and image paths, however, I am using the base child theme, and cannot find the folder for this theme (for this site).  Furthermore, I have installed the Pagelines Customization plugin, and network activated it, however, it does not show up in the list of plugins on the site.

I am wondering how to edit the functions.php file (and/or styles.css, for that matter) of the site in question.  I would love to use the pl-customization plugin, and am also wondering why this is not working.

Could someone please shed some light on this for me?

Thanks in advance for your reply.

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